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Reference Conversion. Reproducibility
Scatter Plots of GRR Exponents/Slopes
Below is an array of interactive scatter plots. Each plot corresponds to a set of conditions defined by the carbon sources (CS) and the limiting nutrients (Lim) indicated on the top and left.
For each set of conditions (plot), the genes whose expression levels are explained well by an exponential model are depicted as black circles.
In the corner of each quadrant there are two links characterizing the set of genes whose exponents reside in the quadrant, set A:
- Red: significantly enriched GO terms for gene set A;
- Green: transcription factors (TFs) likely to regulate genes from set A as determined by the significance of the overlap between gene set A and ChIP-on-chip determined TF targets.
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Natural Limitations on Glucose and Ethanol Carbon Source
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CS: Eth Lim: N |
CS: Eth Lim: Phos |
CS: Glu Lim: Glu |
CS: Glu Lim: N |
CS: Glu Lim: Phos |
CS: Eth Lim: Eth |
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CS: Eth Lim: N |
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CS: Eth Lim: Phos |
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CS: Glu Lim: Glu |
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CS: Glu Lim: N |
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All Limitations
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CS: Eth Lim: N |
CS: Eth Lim: Phos |
CS: Glu Lim: Glu |
CS: Glu Lim: N |
CS: Glu Lim: Phos |
CS: Glu Lim: Sul |
CS: Glu Lim: Leu |
CS: Glu Lim: Ura |
CS: Eth Lim: Eth |
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CS: Eth Lim: N |
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CS: Eth Lim: Phos |
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CS: Glu Lim: Glu |
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CS: Glu Lim: N |
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CS: Glu Lim: Phos |
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CS: Glu Lim: Sul |
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CS: Glu Lim: Leu |
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