Slavov lab | Quantitative Biology
Seeking  principles
in the coordination among protein synthesis, metabolism, cell growth and differentiation
2i Culture Serum+LIF

N2B27 basal medium (500 ml)

482.25 ml DMEM/F12
2.5 ml N2 supplement (100x)
5 ml B27 supplement (50x)
5 ml pen/strep (100x)
2.5 ml NEAA
1 ml of 55mM beta-mercaptoethanol
1.25 ml of 200mM L-Gln | final: 3 mM

2i medium (500ml)

500 ml N2B27 medium
1 ml human insulin (stock: 10mg/ml)
50 μl of 10mM PD0325901; final: 1μM
50 μl of 30mM CHIR99021; final: 3μM
500 units mLIF (50 μl of 1e7 units/ml)

mix ingredients using sterile technique

preparation of culture surface, feeder free

  • cell culture plastic: coat with 0.1 -0.2% gelatin for > 10 min at 37C

start mESCs culture
important: use serum+LIF medium for starting the culture !

  • thaw vial of mESCs quickly, add 1ml of cell suspension to 9 ml of full medium, spin down (7min, 500 RCF), remove supernatant;
  • optional: repeat wash with 10ml full medium
  • resuspend in appropriate amount of culture medium and plate
  • after 1-2 days exchange medium with 2i medium

passaging

  • passage cells every 2-3 days
  • wash plate once with PBS (-Mg, -Ca)
  • add accutase (0.5-1ml per well in 6 well) [important: don't use trypsin to passage cells in 2i!]
  • incubate 2-3 min at 37C
  • triturate cells in accutase to break up colonies
  • add 4ml medium to 1ml cells in accutase
  • spin down (3-5min, 1000-1500 rpm), remove supernatant; resuspend in full medium
  • split at ratio 1:5 - 1:16 (typically 1:8)

freeze cells
important: use serum+LIF medium!

  • resuspend cells in full medium WITH serum
  • add DMSO to final concentration of 10%
  • distribute over multiple cryo-vials (1 ml per vial); make sure each vial contains enough cells for a new culture on a 6cm or 10cm dish
  • freeze cells SLOWLY in Mr. Frosty or in styrofoam container for several days in -80 freezer
  • transfer cells to longterm storage in liquid nitrogen or freezer with equivalent temperature


culture medium (500 ml)

435 ml Knockout DMEM
50 ml ES certified FBS (10%)
5 ml NEAA
1 ml of 55mM beta-mercaptoethanol
5 ml pen/strep (100x)
5 ml L-Gln (stock: 200mM)
500 units mLIF (50 μl of 1e7 units/ml)

mix ingredients using sterile technique and filter with 200nm millipore vacuum filter (low protein binding!!)

preparation of culture surface, feeder free

  • cell culture plastic: coat with 0.1 -0.2% gelatin for > 10 min at 37C
  • glass: coat with 10 μg/ml laminin for 2h at 37C (thaw laminin aliquots slowly in fridge, dilute with sterile PBS)

culture on feeders

  • plate 0.25e6 - 0.5e6 irradiated MEFs per well of a 6-well plate (for other sizes scale accordingly) in complete medium one day before plating mESCs;MEFs can be used for about 1 week
  • plate mESCs directly in the conditioned medium; 

start mESCs culture

  • thaw vial of mESCs quickly, add 1ml of cell suspension to 9 ml of full medium, spin down (3-5min, 1000-1500 rpm), remove supernatant;
  • optional: repeat wash with 10ml full medium
  • resuspend in appropriate amount of culture medium and plate

passaging

  • passage cells every 2-3 days
  • wash plate once with PBS (-Mg, -Ca)
  • add 0.25% trypsin in PBS/EDTA (0.5-1ml per well in 6 well)
  • incubate 2-3 min at 37C
  • triturate cells in trypsin to break up colonies
  • add full medium to quench trypsin (add 4ml medium to 1ml cells in trypsin )
  • spin down (3-5min, 1000-1500 rpm), remove supernatant; resuspend in full medium
  • split at ratio 1:5 - 1:16 (typically 1:8)

freeze cells

  • resuspend cells in full media WITH serum
  • add DMSO to final concentration of 10%
  • distribute over multiple cryo-vials (1 ml per vial); make sure each vial contains enough cells for a new culture on a 6cm or 10cm dish
  • freeze cells SLOWLY in Mr. Frosty or in styrofoam container for several days in -80 freezer
  • transfer cells to longterm storage in liquid nitrogen or freezer with equivalent temperature



These protocols are adopted from the Semrau Laboratory